Transcript: lnc-CST7-1:7

Basic information

LNCipedia transcript ID: lnc-CST7-1:7 
LNCipedia gene ID: lnc-CST7-1
Location (hg19): chr20:24911284-24913515
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1854 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000052943.1|FTMT27900015425.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.7663 non-coding 
CPAT coding probability 4.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CST7-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CST7-1:7
5.0 lnc-CST7-1:7
5.1 lnc-CST8-34:3
5.2 lnc-CST7-1:7