Transcript: lnc-CTAGE5-8:25

Basic information

LNCipedia transcript ID: lnc-CTAGE5-8:25 
LNCipedia gene ID: lnc-CTAGE5-8
Location (hg19): chr14:39944057-39949456
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 487 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00022483
Alternative gene names: XLOC_010811; linc-LRFN5-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.1108 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTAGE5-8:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTAGE5-1:10
3.1 lnc-CTAGE5-1:9
4.0 lnc-CTAGE5-1:9
4.1 lnc-CTAGE5-1:9
5.0 lnc-CTAGE5-1:9
5.1 lnc-BRMS1L-78:25
5.2 lnc-CTAGE5-8:25