Transcript: lnc-CTC1-2:8

Basic information

LNCipedia transcript ID: lnc-CTC1-2:8 
LNCipedia gene ID: lnc-CTC1-2
Location (hg19): chr17:8128139-8128798
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 660 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT145511; ENST00000602405.1
Alternative gene names: ENSG00000269928.1; RP11-849F2.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.7315 non-coding 
CPAT coding probability 3.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTC1-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTC1-2:8
4.0 lnc-CTC1-2:8
4.1 lnc-CTC1-2:8
5.0 lnc-CTC1-2:8
5.1 lnc-PIK3R5-16:1
5.2 lnc-CTC1-2:8