Transcript: lnc-CTR9-5:4

Basic information

LNCipedia transcript ID: lnc-CTR9-5:4 
LNCipedia gene ID: lnc-CTR9-5
Location (hg19): chr11:10952950-10955688
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 962 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000001543.1|ENCT00000064365.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -114.8826 non-coding 
CPAT coding probability 3.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTR9-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CTR9-5:4
5.0 lnc-CTR9-5:4
5.1 lnc-AMPD3-7:4
5.2 lnc-CTR9-5:4