Transcript: lnc-CUL2-3:1

Basic information

LNCipedia transcript ID: lnc-CUL2-3:1 
LNCipedia gene ID: lnc-CUL2-3
Ensembl Gene ID: ENSG00000271335
Ensembl Transcript ID: ENST00000605499
Location (hg19): chr10:35604260-35625329
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 489 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT012735; ENST00000605499.1
Alternative gene names: ENSG00000271335.1; RP11-324I22.4; ENSG00000271335.5; AL117336.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.905 non-coding 
CPAT coding probability 5.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CUL2-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CUL2-3:1
4.0 lnc-CUL2-3:1
4.1 lnc-CUL2-3:1
5.0 lnc-CUL2-3:1
5.1 lnc-CUL2-3:1
5.2 lnc-CUL2-3:1