Transcript: lnc-CXXC5-1:2

Basic information

LNCipedia transcript ID: lnc-CXXC5-1:2 
LNCipedia gene ID: lnc-CXXC5-1
Location (hg19): chr5:139123577-139125847
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1624 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010104; NONHSAT104127
Alternative gene names: XLOC_004573; linc-PSD2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.1679 non-coding 
CPAT coding probability 8.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CXXC5-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PSD2-2:2
3.1 lnc-CXXC5-1:2
4.0 lnc-CXXC5-1:2
4.1 lnc-CXXC5-1:2
5.0 lnc-CXXC5-1:2
5.1 lnc-EIF4EBP3-23:2
5.2 lnc-CXXC5-1:2