Transcript: lnc-CYB5R2-1:10

Basic information

LNCipedia transcript ID: lnc-CYB5R2-1:10 
LNCipedia gene ID: lnc-CYB5R2-1
Ensembl Gene ID: ENSG00000254951
Ensembl Transcript ID: ENST00000529488
Location (hg19): chr11:7775940-7904529
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 660 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000529488.1; RP11-494M8.4-004; OTTHUMT00000385702.1; NONHSAT017804; ENST00000529488.5
Alternative gene names: ENSG00000254951.2; RP11-494M8.4; OTTHUMG00000165666.2; ENSG00000254951.3; ENSG00000254951.7; AC044810.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.849 non-coding 
CPAT coding probability 42.26% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CYB5R2-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR5P3-1:2
4.0 lnc-OR5P3-1:2
4.1 lnc-CYB5R2-1:10
5.0 lnc-CYB5R2-1:10
5.1 lnc-OR10A6-5:9
5.2 lnc-CYB5R2-1:10