Transcript: lnc-CYB5R2-3:11

Basic information

LNCipedia transcript ID: lnc-CYB5R2-3:11 
LNCipedia gene ID: lnc-CYB5R2-3
Location (hg19): chr11:7448497-7528213
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3807 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT017773
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.4521 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYB5R2-3:11 no no no no

Available literature

  1. Wang (2015), Genome-wide differential expression of synaptic long noncoding RNAs in autism spectrum disorder., Transl Psychiatry


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYB5R2-3:11
4.0 lnc-CYB5R2-3:11
4.1 lnc-CYB5R2-3:11
5.0 lnc-CYB5R2-3:11
5.1 lnc-OR10A6-11:8
5.2 lnc-CYB5R2-3:11