Transcript: lnc-CYB5R2-3:12

Basic information

LNCipedia transcript ID: lnc-CYB5R2-3:12 
LNCipedia gene ID: lnc-CYB5R2-3
Location (hg19): chr11:7458868-7487066
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4498 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT017779; NR_103855
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.4521 non-coding 
CPAT coding probability 5.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYB5R2-3:12 no no no no

Available literature

  1. Wang (2015), Genome-wide differential expression of synaptic long noncoding RNAs in autism spectrum disorder., Transl Psychiatry


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYB5R2-3:12
4.0 lnc-CYB5R2-3:12
4.1 lnc-CYB5R2-3:12
5.0 lnc-CYB5R2-3:12
5.1 lnc-OR10A6-11:11
5.2 lnc-CYB5R2-3:12