Transcript: lnc-CYLD-2:14

Basic information

LNCipedia transcript ID: lnc-CYLD-2:14 
LNCipedia gene ID: lnc-CYLD-2
Location (hg19): chr16:50918120-50934962
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1171 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000567534.1; RP11-883G14.1-002; OTTHUMT00000422677.1; NONHSAT142451
Alternative gene names: ENSG00000261241.1; RP11-883G14.1; OTTHUMG00000173283.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.9266 non-coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYLD-2:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-327F22.5.1-2:3
4.0 lnc-RP11-327F22.5.1-2:3
4.1 lnc-RP11-327F22.5.1-2:3
5.0 lnc-RP11-327F22.5.1-2:3
5.1 lnc-ADGRG1-128:10
5.2 lnc-CYLD-2:14