Transcript: lnc-CYLD-2:17

Basic information

LNCipedia transcript ID: lnc-CYLD-2:17 
LNCipedia gene ID: lnc-CYLD-2
Location (hg19): chr16:50918163-50918656
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 290 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024394; NONHSAT142453
Alternative gene names: XLOC_011718; linc-CHD9-10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.9266 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYLD-2:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-327F22.5.1-2:2
3.1 lnc-RP11-327F22.5.1-2:5
4.0 lnc-RP11-327F22.5.1-2:5
4.1 lnc-RP11-327F22.5.1-2:5
5.0 lnc-RP11-327F22.5.1-2:5
5.1 lnc-ADGRG1-128:13
5.2 lnc-CYLD-2:17