Transcript: lnc-CYP27B1-1:1

Basic information

LNCipedia transcript ID: lnc-CYP27B1-1:1 
LNCipedia gene ID: lnc-CYP27B1-1
Location (hg19): chr12:58158794-58162769
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 702 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000546609.1; RP11-571M6.13-001; OTTHUMT00000409259.1
Alternative gene names: ENSG00000257152.1; RP11-571M6.13; OTTHUMG00000170458.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 58.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CYP27B1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYP27B1-1:1
4.0 lnc-CYP27B1-1:1
4.1 lnc-CYP27B1-1:1
5.0 lnc-CYP27B1-1:1
5.1 lnc-PMEL-70:1
5.2 lnc-CYP27B1-1:1