Transcript: lnc-CYS1-1:19

Basic information

LNCipedia transcript ID: lnc-CYS1-1:19 
LNCipedia gene ID: lnc-CYS1-1
RefSeq ID: NR_135558
Location (hg19): chr2:10181680-10183528
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 563 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135558.1
Alternative gene names: LOC101929882


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYS1-1:19 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-RAD51AP2-107:7
5.1 lnc-RAD51AP2-107:7
5.2 lnc-CYS1-1:19