Transcript: lnc-CYS1-9:2

Basic information

LNCipedia transcript ID: lnc-CYS1-9:2 
LNCipedia gene ID: lnc-CYS1-9
Location (hg19): chr2:10253543-10262700
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 9151 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047595.1|ENCT00000239030.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.081 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYS1-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CYS1-9:2
5.0 lnc-CYS1-9:2
5.1 lnc-RAD51AP2-104:2
5.2 lnc-CYS1-9:2