Transcript: lnc-DAOA-1:2

Basic information

LNCipedia transcript ID: lnc-DAOA-1:2 
LNCipedia gene ID: lnc-DAOA-1
Location (hg19): chr13:106063172-106066577
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 269 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT035041; FPKM1_group_8376_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.4887 non-coding 
CPAT coding probability 1.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DAOA-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DAOA-1:2
4.0 lnc-DAOA-1:2
4.1 lnc-DAOA-1:2
5.0 lnc-DAOA-1:2
5.1 lnc-COL4A2-51:1
5.2 lnc-DAOA-1:2