Transcript: lnc-DAOA-47:1

Basic information

LNCipedia transcript ID: lnc-DAOA-47:1 
LNCipedia gene ID: lnc-DAOA-47
Ensembl Gene ID: ENSG00000284966
Ensembl Transcript ID: ENST00000646480
Location (hg19): chr13:107144496-107173978
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5994 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646480.1
Alternative gene names: ENSG00000284966.1; AL138689.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.1673 non-coding 
CPAT coding probability 3.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DAOA-47:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-COL4A2-47:1
5.1 lnc-COL4A2-47:1
5.2 lnc-DAOA-47:1