Transcript: lnc-DAPK1-5:1

Basic information

LNCipedia transcript ID: lnc-DAPK1-5:1 
LNCipedia gene ID: lnc-DAPK1-5
Location (hg19): chr9:89680792-89683618
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 559 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3800_chr9:89680791-89683618_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -181.5413 non-coding 
CPAT coding probability 4.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DAPK1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf170-5:1
4.0 lnc-C9orf170-5:1
4.1 lnc-C9orf170-5:1
5.0 lnc-C9orf170-5:1
5.1 lnc-SECISBP2-45:1
5.2 lnc-DAPK1-5:1