Transcript: lnc-DAXX-2:1

Basic information

LNCipedia transcript ID: lnc-DAXX-2:1 
LNCipedia gene ID: lnc-DAXX-2
Location (hg19): chr6:33384338-33385885
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1378 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT108998
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
TQSSLVPALTDFVR 100% sense-1
Lee translation initiation sites 2 non-coding 
PhyloCSF score 819.0033 coding 
CPAT coding probability 79.08% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DAXX-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DAXX-2:1
4.0 lnc-DAXX-2:1
4.1 lnc-DAXX-2:1
5.0 lnc-DAXX-2:1
5.1 lnc-LEMD2-10:1
5.2 lnc-DAXX-2:1