Transcript: lnc-DBX1-6:1

Basic information

LNCipedia transcript ID: lnc-DBX1-6:1 
LNCipedia gene ID: lnc-DBX1-6
RefSeq ID: NR_015384
Location (hg19): chr11:19732480-19736218
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3739 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT018347; NR_015384; NR_015384.2
Alternative gene names: LOC100126784


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.1591 non-coding 
CPAT coding probability 98.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DBX1-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DBX1-6:1
4.0 lnc-DBX1-6:1
4.1 lnc-DBX1-6:1
5.0 lnc-DBX1-6:1
5.1 lnc-TPH1-26:1
5.2 lnc-DBX1-6:1