Transcript: lnc-DCAF4L2-2:2

Basic information

LNCipedia transcript ID: lnc-DCAF4L2-2:2 
LNCipedia gene ID: lnc-DCAF4L2-2
Location (hg19): chr8:88554214-88767923
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 709 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000440763.2; AF121898.3-003; OTTHUMT00000375297.1; NONHSAT127578
Alternative gene names: ENSG00000253500.1; AF121898.3; OTTHUMG00000163764.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.9156 non-coding 
CPAT coding probability 2.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DCAF4L2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DCAF4L2-2:2
4.0 lnc-DCAF4L2-2:2
4.1 lnc-DCAF4L2-2:2
5.0 lnc-DCAF4L2-2:2
5.1 lnc-ZNF706-230:2
5.2 lnc-DCAF4L2-2:2