Transcript: lnc-DCC-5:1

Basic information

LNCipedia transcript ID: lnc-DCC-5:1 
LNCipedia gene ID: lnc-DCC-5
Location (hg19): chr18:49362993-49375219
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 312 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1580_chr18:49362992-49375219_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -229.7504 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DCC-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC109315.1-4:1
4.0 lnc-AC109315.1-4:1
4.1 lnc-AC109315.1-4:1
5.0 lnc-AC109315.1-4:1
5.1 lnc-DYNAP-29:1
5.2 lnc-DCC-5:1