Transcript: lnc-DCP1B-9:3

Basic information

LNCipedia transcript ID: lnc-DCP1B-9:3 
LNCipedia gene ID: lnc-DCP1B-9
Location (hg19): chr12:2361036-2374156
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1753 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000011013.1|ENCT00000098058.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -85.7237 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DCP1B-9:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DCP1B-9:3
5.0 lnc-DCP1B-9:3
5.1 lnc-CHD4-102:2
5.2 lnc-DCP1B-9:3