Transcript: lnc-DCUN1D1-6:1

Basic information

LNCipedia transcript ID: lnc-DCUN1D1-6:1 
LNCipedia gene ID: lnc-DCUN1D1-6
Location (hg19): chr3:181893447-181895007
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 456 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007317; NONHSAT093612
Alternative gene names: XLOC_003347; linc-DNAJC19-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -568.5852 non-coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DCUN1D1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DCUN1D1-4:1
3.1 lnc-DCUN1D1-6:1
4.0 lnc-DCUN1D1-6:1
4.1 lnc-DCUN1D1-6:1
5.0 lnc-DCUN1D1-6:1
5.1 lnc-MCCC1-6:3
5.2 lnc-DCUN1D1-6:1