Transcript: lnc-DCUN1D1-6:2

Basic information

LNCipedia transcript ID: lnc-DCUN1D1-6:2 
LNCipedia gene ID: lnc-DCUN1D1-6
Location (hg19): chr3:181867283-181894892
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 567 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006719; NONHSAT093610
Alternative gene names: XLOC_003347; linc-DNAJC19-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.0785 non-coding 
CPAT coding probability 8.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DCUN1D1-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DCUN1D1-4:2
3.1 lnc-DCUN1D1-6:2
4.0 lnc-DCUN1D1-6:2
4.1 lnc-DCUN1D1-6:2
5.0 lnc-DCUN1D1-6:2
5.1 lnc-MCCC1-6:4
5.2 lnc-DCUN1D1-6:2