Transcript: lnc-DDT-3:1

Basic information

LNCipedia transcript ID: lnc-DDT-3:1 
LNCipedia gene ID: lnc-DDT-3
Location (hg19): chr22:24312225-24313365
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1141 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA933:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.3357 non-coding 
CPAT coding probability 5.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DDT-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-DDT-3:1
4.1 lnc-DDT-3:1
5.0 lnc-DDT-3:1
5.1 lnc-SCARF2-76:1
5.2 lnc-DDT-3:1