Transcript: lnc-DDX18-5:1

Basic information

LNCipedia transcript ID: lnc-DDX18-5:1 
LNCipedia gene ID: lnc-DDX18-5
Location (hg19): chr2:118307805-118309964
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 496 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1933_chr2:118307804-118309964_lymphNode
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -191.8793 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DDX18-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DDX18-5:1
4.0 lnc-DDX18-5:1
4.1 lnc-DDX18-5:1
5.0 lnc-DDX18-5:1
5.1 lnc-MARCO-16:1
5.2 lnc-DDX18-5:1