Transcript: lnc-DDX41-2:6

Basic information

LNCipedia transcript ID: lnc-DDX41-2:6 
LNCipedia gene ID: lnc-DDX41-2
Location (hg19): chr5:176946792-176949163
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 580 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105430
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -261.4917 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DDX41-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DDX41-2:6
4.0 lnc-DDX41-2:6
4.1 lnc-DDX41-2:6
5.0 lnc-DDX41-2:6
5.1 lnc-PDLIM7-2:2
5.2 lnc-DDX41-2:6