Transcript: lnc-DEDD2-3:1

Basic information

LNCipedia transcript ID: lnc-DEDD2-3:1 
LNCipedia gene ID: lnc-DEDD2-3
Location (hg19): chr19:42679915-42689519
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 841 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_1694_chr19:42679914-42689519_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.7554 non-coding 
CPAT coding probability 2.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DEDD2-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DEDD2-3:1
4.0 lnc-DEDD2-3:1
4.1 lnc-DEDD2-3:1
5.0 lnc-DEDD2-3:1
5.1 lnc-PRX-55:1
5.2 lnc-DEDD2-3:1