Transcript: lnc-DEF8-2:7

Basic information

LNCipedia transcript ID: lnc-DEF8-2:7 
LNCipedia gene ID: lnc-DEF8-2
Location (hg19): chr16:90039026-90045478
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 573 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT144617
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -463.2275 non-coding 
CPAT coding probability 36.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DEF8-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DEF8-2:7
4.0 lnc-DEF8-2:7
4.1 lnc-DEF8-2:7
5.0 lnc-DEF8-2:7
5.1 lnc-SPG7-32:4
5.2 lnc-DEF8-2:7