Transcript: lnc-DERA-1:4

Basic information

LNCipedia transcript ID: lnc-DERA-1:4 
LNCipedia gene ID: lnc-DERA-1
Location (hg19): chr12:16535761-16591695
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2152 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT027140
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 44.362 non-coding 
CPAT coding probability 3.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DERA-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DERA-1:4
4.0 lnc-DERA-1:4
4.1 lnc-DERA-1:4
5.0 lnc-DERA-1:4
5.1 lnc-BCL2L14-72:1
5.2 lnc-DERA-1:4