Transcript: lnc-DERA-5:1

Basic information

LNCipedia transcript ID: lnc-DERA-5:1 
LNCipedia gene ID: lnc-DERA-5
Location (hg19): chr12:16559492-16561497
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1983 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT027141; FPKM1_group_5832_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.7862 non-coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DERA-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DERA-5:1
4.0 lnc-DERA-5:1
4.1 lnc-DERA-5:1
5.0 lnc-DERA-5:1
5.1 lnc-BCL2L14-71:1
5.2 lnc-DERA-5:1