Transcript: lnc-DERL1-3:4

Basic information

LNCipedia transcript ID: lnc-DERL1-3:4 
LNCipedia gene ID: lnc-DERL1-3
Location (hg19): chr8:123789843-123793828
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2011 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272384.1|HBMT00001415026.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -18.981 non-coding 
CPAT coding probability 16.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DERL1-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-973F15.1.1-3:4
5.0 lnc-RP11-973F15.1.1-3:4
5.1 lnc-WASHC5-45:2
5.2 lnc-DERL1-3:4