Transcript: lnc-DERL1-7:1

Basic information

LNCipedia transcript ID: lnc-DERL1-7:1 
LNCipedia gene ID: lnc-DERL1-7
Location (hg19): chr8:123497754-123502054
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 551 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000530350; ENST00000530350.1; RP11-96B2.1-001; OTTHUMT00000382021.1; NONHSAT128488
Alternative gene names: ENSG00000255325; RP11-96B2.1; ENSG00000255325.1; OTTHUMG00000165131.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.596 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DERL1-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-973F15.1.1-4:1
3.1 lnc-RP11-973F15.1.1-4:1
4.0 lnc-RP11-973F15.1.1-4:1
4.1 lnc-RP11-973F15.1.1-4:1
5.0 lnc-RP11-973F15.1.1-4:1
5.1 lnc-WASHC5-49:1
5.2 lnc-DERL1-7:1