Transcript: lnc-DET1-1:17

Basic information

LNCipedia transcript ID: lnc-DET1-1:17 
LNCipedia gene ID: lnc-DET1-1
Location (hg19): chr15:89045155-89052959
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2531 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000501841
Alternative gene names: ENSG00000248072


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.4216 non-coding 
CPAT coding probability 4.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DET1-1:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DET1-1:1
3.1 lnc-DET1-1:1
4.0 lnc-MRPL46.1-1:3
4.1 lnc-MRPL46.1-1:3
5.0 lnc-MRPL46.1-1:3
5.1 lnc-DET1-1:10
5.2 lnc-DET1-1:17