Transcript: lnc-DGCR2-5:3

Basic information

LNCipedia transcript ID: lnc-DGCR2-5:3 
LNCipedia gene ID: lnc-DGCR2-5
Location (hg19): chr22:18962132-18986828
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1859 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT083311
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.5081 non-coding 
CPAT coding probability 19.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DGCR2-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DGCR2-5:3
4.0 lnc-DGCR2-5:3
4.1 lnc-DGCR2-5:3
5.0 lnc-DGCR2-5:3
5.1 lnc-RTN4R-33:3
5.2 lnc-DGCR2-5:3