Transcript: lnc-DGCR6-2:33

Basic information

LNCipedia transcript ID: lnc-DGCR6-2:33 
LNCipedia gene ID: lnc-DGCR6-2
Location (hg19): chr22:18848964-18851914
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 897 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029754; NONHSAT083296
Alternative gene names: XLOC_014147; linc-DGCR6-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.5678 non-coding 
CPAT coding probability 8.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DGCR6-2:33 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC008132.13.1-1:1
3.1 lnc-AC008132.13.1-2:1
4.0 lnc-AC008132.13.1-2:1
4.1 lnc-AC008132.13.1-2:1
5.0 lnc-AC008132.13.1-2:1
5.1 lnc-SERPIND1-46:9
5.2 lnc-DGCR6-2:33