Transcript: lnc-DHCR7-3:2

Basic information

LNCipedia transcript ID: lnc-DHCR7-3:2 
LNCipedia gene ID: lnc-DHCR7-3
RefSeq ID: NR_038862
Location (hg19): chr11:71116792-71134400
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2162 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT022676; NR_038862; NR_038862.1
Alternative gene names: FLJ42102


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 330.6982 coding 
CPAT coding probability 44.31% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DHCR7-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHCR7-3:2
4.0 lnc-DHCR7-3:2
4.1 lnc-DHCR7-3:2
5.0 lnc-DHCR7-3:2
5.1 lnc-UCP3-69:2
5.2 lnc-DHCR7-3:2