Transcript: lnc-DHX38-28:1

Basic information

LNCipedia transcript ID: lnc-DHX38-28:1 
LNCipedia gene ID: lnc-DHX38-28
Location (hg19): chr16:73056076-73058767
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2692 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ncRnaDb_ncrna_FR229340_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.0402 non-coding 
CPAT coding probability 5.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX38-28:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-44L9.1.1-13:1
4.0 lnc-RP11-44L9.1.1-13:1
4.1 lnc-RP11-44L9.1.1-13:1
5.0 lnc-RP11-44L9.1.1-13:1
5.1 lnc-MARVELD3-38:1
5.2 lnc-DHX38-28:1