Transcript: lnc-DHX38-40:4

Basic information

LNCipedia transcript ID: lnc-DHX38-40:4 
LNCipedia gene ID: lnc-DHX38-40
Location (hg19): chr16:73094279-73096215
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1937 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT143628
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.8646 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX38-40:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-44L9.1.1-12:3
4.0 lnc-RP11-44L9.1.1-12:3
4.1 lnc-RP11-44L9.1.1-12:3
5.0 lnc-RP11-44L9.1.1-12:3
5.1 lnc-MARVELD3-40:4
5.2 lnc-DHX38-40:4