Transcript: lnc-DKK1-5:6

Basic information

LNCipedia transcript ID: lnc-DKK1-5:6 
LNCipedia gene ID: lnc-DKK1-5
Location (hg19): chr10:54251244-54570411
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 573 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000115129.1|ENCT00000046199.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.6025 non-coding 
CPAT coding probability 2.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DKK1-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DKK1-5:6
5.0 lnc-DKK1-5:6
5.1 lnc-DKK1-5:6
5.2 lnc-DKK1-5:6