Transcript: lnc-DKK3-10:2

Basic information

LNCipedia transcript ID: lnc-DKK3-10:2 
LNCipedia gene ID: lnc-DKK3-10
Location (hg19): chr11:12129011-12131894
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2034 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000004850.1|ENCT00000075357.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.1118 non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DKK3-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DKK3-10:2
5.0 lnc-DKK3-10:2
5.1 lnc-COPB1-26:4
5.2 lnc-DKK3-10:2