Transcript: lnc-DLAT-1:1

Basic information

LNCipedia transcript ID: lnc-DLAT-1:1 
LNCipedia gene ID: lnc-DLAT-1
Ensembl Gene ID: ENSG00000255334
Ensembl Transcript ID: ENST00000530733
Location (hg19): chr11:111886031-111886848
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 322 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000530733.1; RP11-708L7.6-001; OTTHUMT00000391842.1; NONHSAT024172
Alternative gene names: ENSG00000255334.1; RP11-708L7.6; OTTHUMG00000166913.1; AP000907.3; AP000907.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DLAT-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DLAT-1:1
4.0 lnc-DLAT-1:1
4.1 lnc-DLAT-1:1
5.0 lnc-DLAT-1:1
5.1 lnc-PTS-11:1
5.2 lnc-DLAT-1:1