Transcript: lnc-DLC1-1:1

Basic information

LNCipedia transcript ID: lnc-DLC1-1:1 
LNCipedia gene ID: lnc-DLC1-1
Location (hg19): chr8:13415166-13462119
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1806 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000529018.1; RP11-145O15.3-001; OTTHUMT00000384399.1; NONHSAT125204
Alternative gene names: ENSG00000255069.1; RP11-145O15.3; OTTHUMG00000165481.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.6262 non-coding 
CPAT coding probability 8.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DLC1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DLC1-1:1
4.0 lnc-DLC1-1:1
4.1 lnc-DLC1-1:1
5.0 lnc-DLC1-1:1
5.1 lnc-PINX1-73:2
5.2 lnc-DLC1-1:1