Transcript: lnc-DLGAP2-2:5

Basic information

LNCipedia transcript ID: lnc-DLGAP2-2:5 
LNCipedia gene ID: lnc-DLGAP2-2
Location (hg19): chr8:607192-611619
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3258 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000499740
Alternative gene names: ENSG00000244964


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.1727 non-coding 
CPAT coding probability 42.76% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DLGAP2-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FBXO25-2:1
3.1 lnc-FBXO25-2:1
4.0 lnc-FBXO25-2:1
4.1 lnc-FBXO25-2:1
5.0 lnc-FBXO25-2:1
5.1 lnc-DEFB106A-113:1
5.2 lnc-DLGAP2-2:5