Transcript: lnc-DLGAP3-2:6

Basic information

LNCipedia transcript ID: lnc-DLGAP3-2:6 
LNCipedia gene ID: lnc-DLGAP3-2
Location (hg19): chr1:35415397-35416324
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 339 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT002326
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.7244 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DLGAP3-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DLGAP3-2:6
4.0 lnc-DLGAP3-2:6
4.1 lnc-DLGAP3-2:6
5.0 lnc-DLGAP3-2:6
5.1 lnc-COL8A2-43:6
5.2 lnc-DLGAP3-2:6