Transcript: lnc-DLX2-2:1

Basic information

LNCipedia transcript ID: lnc-DLX2-2:1 
LNCipedia gene ID: lnc-DLX2-2
Ensembl Gene ID: ENSG00000226963
Ensembl Transcript ID: ENST00000441212
Location (hg19): chr2:173292502-173293331
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 558 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000441212.1; AC078883.4-001; OTTHUMT00000334501.1; NONHSAT075504
Alternative gene names: ENSG00000226963.1; AC078883.4; OTTHUMG00000154231.1; AC078883.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 67.455 coding 
CPAT coding probability 42.24% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DLX2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DLX2-2:1
4.0 lnc-DLX2-2:1
4.1 lnc-DLX2-2:1
5.0 lnc-DLX2-2:1
5.1 lnc-OLA1-33:1
5.2 lnc-DLX2-2:1