Transcript: lnc-DMAC1-6:1

Basic information

LNCipedia transcript ID: lnc-DMAC1-6:1 
LNCipedia gene ID: lnc-DMAC1-6
Location (hg19): chr9:8700595-8701552
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 485 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000418571.1; RP11-134K1.3-001; OTTHUMT00000051709.1; NONHSAT130189
Alternative gene names: ENSG00000235389.1; RP11-134K1.3; OTTHUMG00000019542.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.6783 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DMAC1-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf123-6:1
4.0 lnc-C9orf123-6:1
4.1 lnc-C9orf123-6:1
5.0 lnc-C9orf123-6:1
5.1 lnc-CER1-24:1
5.2 lnc-DMAC1-6:1