Transcript: lnc-DMRTA1-24:1

Basic information

LNCipedia transcript ID: lnc-DMRTA1-24:1 
LNCipedia gene ID: lnc-DMRTA1-24
Location (hg19): chr9:23435576-23436204
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 331 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT130465; FPKM1_group_32871_transcript_22
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -309.5565 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DMRTA1-24:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DMRTA1-24:1
4.0 lnc-DMRTA1-24:1
4.1 lnc-DMRTA1-24:1
5.0 lnc-DMRTA1-24:1
5.1 lnc-RECK-121:1
5.2 lnc-DMRTA1-24:1