Transcript: lnc-DMRTA1-28:1

Basic information

LNCipedia transcript ID: lnc-DMRTA1-28:1 
LNCipedia gene ID: lnc-DMRTA1-28
Location (hg19): chr9:22508541-22571968
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 508 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234840.1|ENCT00000444671.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.6573 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DMRTA1-28:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DMRTA1-28:1
5.0 lnc-DMRTA1-28:1
5.1 lnc-RECK-138:1
5.2 lnc-DMRTA1-28:1