Transcript: lnc-DMRTA2-1:10

Basic information

LNCipedia transcript ID: lnc-DMRTA2-1:10 
LNCipedia gene ID: lnc-DMRTA2-1
Ensembl Gene ID: ENSG00000284696
Ensembl Transcript ID: ENST00000642061
Location (hg19): chr1:50760983-50761218
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 236 bp
Exons: 1
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642061.1
Alternative gene names: ENSG00000284696.1; AL596275.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -243.4998 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DMRTA2-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DMRTA2-1:10
5.1 lnc-DMRTA2-1:10
5.2 lnc-DMRTA2-1:10